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AMIGOpy

Welcome to the AMIGOpy Documentation

This site documents the AMIGOpy software, including its main functionalities, coding standards, and development roadmap.

Note for developers
This documentation includes in-depth details about the source code, architecture, and contribution guidelines.
Regular users should focus on the pages describing the main features, user guides, and roadmap — no need to dive into implementation details unless you're contributing.

Overview

AMIGOpy is a medical imaging toolkit designed to support radiotherapy research and clinical workflows.

It provides tools for:

  • ⚡ Radiotherapy workflows — treatment planning, data handling, and advanced analysis
  • 🧩 Segmentation & Autocontouring — integrated with AI-based APIs and customizable pipelines
  • 🎲 Monte Carlo simulation — dose calculation, modeling, and validation for research and clinical applications
  • 🌐 3D / 4D Rendering — high-quality visualization for volumetric and time-resolved imaging data
  • 🧠 Research & Development — flexible tools for rapid prototyping, innovation, and integration with external platforms

AMIGOpy is designed to bring together automation, research tools, and clinical support into a single, extensible platform.
It not only provides built-in functionalities but also integrates and expands upon community-driven developments, creating a powerful and collaborative software ecosystem.

Documentation Structure

1. Installation

See Installation
Step-by-step instructions for installing both the compiled version and the developer setup.

2. Coding & Documentation Guidelines

See Software Documentation Guidelines
Clear standards for writing docstrings, using type hints, and maintaining consistent code style.
These rules are mandatory for all contributors.

3. Software Variables & Developer Notes

See General Variable Descriptions
An overview of variable naming conventions, data structures, and core architecture.